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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs70600 chr17:44860021 C/T LOC644172 chr17:43677491-43679748:- 1.15 19.62 2.72E-63 Box Plot
THCA rs70600 chr17:44860021 C/T LRRC37A4 chr17:43578685-43595516:- -0.74 -17.88 4.1E-55 Box Plot
THCA rs70600 chr17:44860021 C/T MGC57346 chr17:43697712-43715327:+ 0.54 10.19 3.5E-22 Box Plot
THCA rs70600 chr17:44860021 C/T PLEKHM1 chr17:43513266-43568115:- 0.37 7.21 2.25E-12 Box Plot
THCA rs70602 chr17:44859715 T/C C17orf69 chr17:43716341-43723594:+ -0.51 -11.36 1.21E-26 Box Plot
THCA rs70602 chr17:44859715 T/C LOC644172 chr17:43677491-43679748:- -1.12 -19.47 1.37E-62 Box Plot
THCA rs70602 chr17:44859715 T/C LRRC37A4 chr17:43578685-43595516:- 0.7 16.9 1.38E-50 Box Plot
THCA rs70602 chr17:44859715 T/C MGC57346 chr17:43697712-43715327:+ -0.49 -9.47 1.34E-19 Box Plot
THCA rs70602 chr17:44859715 T/C PLEKHM1 chr17:43513266-43568115:- -0.34 -6.71 5.47E-11 Box Plot
THCA rs7069040 chr10:45829092 C/T AGAP8 chr10:51224681-51371321:- 0.45 6.02 3.57E-9 Box Plot
THCA rs7069051 chr10:45829111 C/G AGAP8 chr10:51224681-51371321:- 0.45 6.07 2.62E-9 Box Plot
THCA rs7069872 chr10:51818432 A/C FAM21B chr10:47894023-47949412:+ 0.58 7.62 1.38E-13 Box Plot
THCA rs7074294 chr10:51818588 T/C FAM21B chr10:47894023-47949412:+ 0.58 7.55 2.19E-13 Box Plot
THCA rs7078251 chr10:45822056 A/C AGAP8 chr10:51224681-51371321:- 0.45 6.02 3.57E-9 Box Plot
THCA rs7081609 chr10:88939962 T/C FAM35B chr10:46897641-46939143:+ 0.63 10.1 7.42E-22 Box Plot